C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger protein 483
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309235 ZNF483-002 ENSG00000173258 9606 + 9:111525233-111544432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309235
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309235 0.314±0.00 1.867±0.00 15.604±7.50 0.548±0.23 0.389±0.03 0.880±0.49 0.273±0.01 2.202±2.18 0.658±0.39 0.012±0.00 0.786±1.03 0.019±0.00 1.771±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XL CIL_0005XL_0001 CGP 9:111360692-111577844
CIL_0005XH CIL_0005XH_0001 CGP 9:111525159-111599855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA:IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 2e-40 172
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 3e-38 165
ENSMUST00000189452 Zfp119b-002 protein_coding Mus_musculus 5e-21 108
ENSMUST00000056147 Zfp119b-001 protein_coding Mus_musculus 5e-21 108
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 2e-19 102
ENSMUST00000054780 Zfp959-001 protein_coding Mus_musculus 3e-18 99
ENSMUST00000007884 Zfp54-001 protein_coding Mus_musculus 3e-18 99
ENSMUST00000165230 Zfp54-002 protein_coding Mus_musculus 3e-18 99
ENSMUST00000156218 Zfp938-002 nonsense_mediated_decay Mus_musculus 5e-16 92
ENSMUST00000041264 Zfp938-001 protein_coding Mus_musculus 5e-16 92
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 5e-16 92
ENSMUST00000184117 2010315B03Rik-001 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000177714 2010315B03Rik-001 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000054072 Zfp81-001 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000179175 Gm13247-201 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000105735 Gm13247-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000074369 Zfp825-201 protein_coding Mus_musculus 0.00000000005 75
ENSMUST00000039726 3110052M02Rik-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000076123 Zfp58-001 protein_coding Mus_musculus 0.000001 60
ENSMUST00000171518 Zfp58-002 protein_coding Mus_musculus 0.000001 60
ENSMUST00000079242 Zfp52-201 protein_coding Mus_musculus 0.000001 60
ENSMUST00000118425 Zfp389-001 processed_pseudogene Mus_musculus 0.000005 58
ENSMUST00000099418 Gm10770-201 protein_coding Mus_musculus 0.000005 58
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 0.00002 57
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 0.00002 57

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