C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165230 Zfp54-002 ENSMUSG00000023882 10090 + 17:21423227-21435640 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaENSMUST00000165230
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta
ENSMUST00000165230 0.235±0.02 0.147±0.00 0.146±0.05 0.545±0.00 0.069±0.03 0.106±0.00 0.216±0.10 0.302±0.00 0.069±0.04 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_000B CGP 17:21383748-21435640
CIL_0004HA CIL_0004HA_0003 CGP 17:21423227-21465591

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000211936 ZNF184-201 protein_coding Homo_sapiens 3e-23 115
ENST00000221355 ZNF780B-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000243639 ZNF468-002 protein_coding Homo_sapiens 7e-20 104
ENST00000243643 ZNF415-001 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000282869 ZNF117-002 protein_coding Homo_sapiens 2e-34 154
ENST00000291598 ZNF583-201 protein_coding Homo_sapiens 5e-20 104
ENST00000304239 ZNF420-002 protein_coding Homo_sapiens 1e-19 102
ENST00000309235 ZNF483-002 protein_coding Homo_sapiens 3e-18 99
ENST00000328088 ZNF807-001 unprocessed_pseudogene Homo_sapiens 1e-18 99
ENST00000328178 ZNF85-001 protein_coding Homo_sapiens 0 224
ENST00000330123 ZNF616-002 protein_coding Homo_sapiens 0.0000000000008 81
ENST00000330173 ZNF570-001 protein_coding Homo_sapiens 6e-22 111
ENST00000330619 ZNF470-001 protein_coding Homo_sapiens 3e-30 139
ENST00000333201 ZNF583-001 protein_coding Homo_sapiens 9e-20 104
ENST00000334116 ZNF529-002 protein_coding Homo_sapiens 0.00000004 66
ENST00000334197 ZNF347-001 protein_coding Homo_sapiens 6e-36 158
ENST00000337995 ZNF420-001 protein_coding Homo_sapiens 2e-19 102
ENST00000338977 ZNF721-001 protein_coding Homo_sapiens 3e-24 119
ENST00000344930 ZNF107-002 protein_coding Homo_sapiens 8.40779e-45 187
ENST00000345030 ZNF85-003 protein_coding Homo_sapiens 0 224
ENST00000355095 ZNF736-201 protein_coding Homo_sapiens 4e-20 104
ENST00000355504 ZNF493-003 protein_coding Homo_sapiens 0.0003 53
ENST00000357666 ZNF816-002 protein_coding Homo_sapiens 0.000000000000005 88
ENST00000361584 ZFP69B-201 protein_coding Homo_sapiens 0.00000002 66
ENST00000361807 ZNF485-001 protein_coding Homo_sapiens 3e-16 92
ENST00000374227 ZFP37-001 protein_coding Homo_sapiens 2e-16 94
ENST00000374435 ZNF485-002 protein_coding Homo_sapiens 3e-16 92
ENST00000377419 ZNF184-001 protein_coding Homo_sapiens 2e-23 115
ENST00000389534 ZNF841-201 protein_coding Homo_sapiens 2e-35 156
ENST00000390651 ZNF468-201 protein_coding Homo_sapiens 7e-20 104
ENST00000391709 ZNF470-201 protein_coding Homo_sapiens 3e-30 139
ENST00000391783 ZNF28-002 protein_coding Homo_sapiens 5e-28 130
ENST00000392170 ZNF566-001 protein_coding Homo_sapiens 2e-18 99
ENST00000392288 ZNF493-002 protein_coding Homo_sapiens 0.0003 53
ENST00000395375 ZNF273-007 nonsense_mediated_decay Homo_sapiens 4.99997e-41 174
ENST00000395391 ZNF107-001 protein_coding Homo_sapiens 9.80909e-45 187
ENST00000396424 ZNF665-001 protein_coding Homo_sapiens 3e-34 152
ENST00000398253 ZFP90-201 protein_coding Homo_sapiens 0.00008 55
ENST00000411995 ZFP69B-001 protein_coding Homo_sapiens 0.00000002 66
ENST00000414387 ZNF674-004 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000418871 ZNF160-201 protein_coding Homo_sapiens 0.00008 55
ENST00000420450 ZNF345-001 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000421033 ZNF415-201 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000423484 ZNF736-003 protein_coding Homo_sapiens 1e-19 104
ENST00000423627 ZNF107-201 protein_coding Homo_sapiens 9.80909e-45 187
ENST00000423823 ZNF302-002 protein_coding Homo_sapiens 1e-16 94
ENST00000424129 ZNF566-002 protein_coding Homo_sapiens 2e-18 99
ENST00000426391 ZNF841-001 protein_coding Homo_sapiens 2e-35 156
ENST00000427002 ZNF566-009 protein_coding Homo_sapiens 5e-19 99
ENST00000429604 ZNF160-202 protein_coding Homo_sapiens 0.00008 55
ENST00000434248 ZNF780B-002 protein_coding Homo_sapiens 0.000000000003 81
ENST00000434377 ZNF566-201 protein_coding Homo_sapiens 4e-18 99
ENST00000438150 ZNF28-004 protein_coding Homo_sapiens 2e-27 130
ENST00000444460 ZNF816-001 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000446502 ZNF302-004 protein_coding Homo_sapiens 1e-16 94
ENST00000452676 ZNF347-201 protein_coding Homo_sapiens 6e-36 158
ENST00000452939 ZNF566-008 protein_coding Homo_sapiens 6e-19 99
ENST00000457749 ZNF28-001 protein_coding Homo_sapiens 1e-27 130
ENST00000457781 ZNF302-001 protein_coding Homo_sapiens 1e-16 94
ENST00000460937 ZNF566-006 retained_intron Homo_sapiens 5e-19 99
ENST00000469416 ZFP69B-002 retained_intron Homo_sapiens 0.00000002 66
ENST00000476120 ZNF273-001 protein_coding Homo_sapiens 3.00004e-41 174
ENST00000480361 ZNF566-005 retained_intron Homo_sapiens 4e-19 99
ENST00000484445 ZFP69B-003 protein_coding Homo_sapiens 0.00000002 66
ENST00000500065 ZNF415-025 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000505242 ZNF302-005 protein_coding Homo_sapiens 1e-16 94
ENST00000505365 ZNF302-006 protein_coding Homo_sapiens 1e-16 94
ENST00000509196 ZNF302-007 retained_intron Homo_sapiens 1e-16 94
ENST00000511833 ZNF721-009 protein_coding Homo_sapiens 2e-24 119
ENST00000523374 ZNF674-001 protein_coding Homo_sapiens 0.000000000000007 88
ENST00000527278 ZNF273-002 processed_transcript Homo_sapiens 4.00001e-41 174
ENST00000529555 ZNF345-003 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000553380 ZFP37-002 protein_coding Homo_sapiens 8e-17 94
ENST00000555206 ZFP37-003 protein_coding Homo_sapiens 9e-17 94
ENST00000563169 ZFP90-010 protein_coding Homo_sapiens 0.00005 55
ENST00000564558 ZFP90-002 nonsense_mediated_decay Homo_sapiens 0.00008 55
ENST00000570495 ZFP90-001 protein_coding Homo_sapiens 0.00008 55
ENST00000571720 ZFP90-024 retained_intron Homo_sapiens 0.00007 55
ENST00000585612 ZNF583-006 processed_transcript Homo_sapiens 5e-20 104
ENST00000586475 ZNF570-003 protein_coding Homo_sapiens 2e-22 111
ENST00000587029 ZNF420-008 protein_coding Homo_sapiens 4e-20 102
ENST00000587082 ZNF420-007 nonsense_mediated_decay Homo_sapiens 4e-20 102
ENST00000588644 ZNF570-002 nonsense_mediated_decay Homo_sapiens 2e-22 111
ENST00000589046 ZNF345-010 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000589245 ZNF420-005 protein_coding Homo_sapiens 4e-20 102
ENST00000589461 ZNF420-006 nonsense_mediated_decay Homo_sapiens 3e-20 102
ENST00000591340 ZNF529-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000594011 ZNF415-003 protein_coding Homo_sapiens 0.000000000000005 88
ENST00000594295 ZNF841-002 protein_coding Homo_sapiens 2e-35 156
ENST00000595193 ZNF415-002 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000595646 ZNF468-001 protein_coding Homo_sapiens 8e-20 104
ENST00000597503 ZNF415-004 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000597748 ZNF415-007 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000598578 ZNF415-005 nonsense_mediated_decay Homo_sapiens 0.000000000000004 88
ENST00000599056 ZNF160-001 protein_coding Homo_sapiens 0.00008 55
ENST00000600120 ZNF415-006 nonsense_mediated_decay Homo_sapiens 0.000000000000005 88
ENST00000600228 ZNF616-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000600412 ZNF665-002 protein_coding Homo_sapiens 1e-34 152
ENST00000601023 ZNF85-004 protein_coding Homo_sapiens 0 224
ENST00000601421 ZNF160-003 protein_coding Homo_sapiens 0.00009 55
ENST00000601469 ZNF347-003 protein_coding Homo_sapiens 4e-36 158
ENST00000601493 ZNF415-008 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000610793 ZNF117-201 protein_coding Homo_sapiens 2e-35 154
ENST00000611516 ZNF816-201 protein_coding Homo_sapiens 0.000000000000005 88
ENST00000612293 ZNF85-201 protein_coding Homo_sapiens 0 224
ENST00000612719 ZNF345-201 protein_coding Homo_sapiens 0.000000000000005 88
ENST00000613159 ZNF85-003 protein_coding Homo_sapiens 0 224
ENST00000613363 ZNF302-201 protein_coding Homo_sapiens 1e-16 94
ENST00000613690 ZNF107-202 protein_coding Homo_sapiens 9.80909e-45 187
ENST00000614069 ZNF345-202 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000615320 ZNF85-001 protein_coding Homo_sapiens 0 224
ENST00000617676 ZNF780B-201 protein_coding Homo_sapiens 0.000000000003 81
ENST00000620222 ZNF117-202 protein_coding Homo_sapiens 9e-35 154
ENST00000620827 ZNF107-203 protein_coding Homo_sapiens 9.80909e-45 187
ENST00000623629 ZNF735P-201 protein_coding Homo_sapiens 9.80909e-45 185

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