C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copper chaperone for superoxide dismutase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310190 CCS-009 ENSG00000173992 9606 + 11:66593241-66605919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310190 12.867±0.00 11.189±0.00 2.211±0.00 7.434±4.92 11.932±0.00 10.182±9.28 2.461±1.60 13.392±5.43 13.523±11.68 5.206±2.43 4.101±3.28 10.540±8.07 12.552±3.60 17.202±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YI CIL_0003YI_0002 CGP 11:66592821-66627347

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004784 IEA superoxide dismutase activity
GO:0006801 IEA superoxide metabolic process
GO:0019430 IEA removal of superoxide radicals
GO:0030001 IEA metal ion transport
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037246 Ccs-201 protein_coding Mus_musculus 0 881

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