C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium regulated heat stable protein 1, 24kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311052 CARHSP1-002 ENSG00000153048 9606 - 16:8854913-8869009 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000311052
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000311052 72.164±0.00 157.405±0.00 95.271±0.00 98.301±0.00 4.279±0.00 127.393±0.00 86.330±0.00 51.379±0.00 115.101±19.74 78.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EW CIL_0000EW_0001 CGP 16:8788823-8869012
CIL_0000EV CIL_0000EV_0001 CGP 16:8852942-8964514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000177 ISS cytoplasmic exosome (RNase complex)
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005829 ISS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0019902 NAS phosphatase binding
GO:0035556 TAS intracellular signal transduction
GO:0043186 ISS P granule
GO:0043488 ISS regulation of mRNA stability
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008537 Carhsp1-201 protein_coding Mus_musculus 0 676
ENSMUST00000060997 Gm9791-001 processed_pseudogene Mus_musculus 0 645

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