C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyruvate dehyrogenase phosphatase catalytic subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311765 PDP2-001 ENSG00000172840 9606 + 16:66880361-66891096 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryENST00000311765
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000311765 0.251±0.00 0.781±0.00 1.380±0.52 2.179±0.00 0.858±0.00 0.068±0.00 0.801±0.00 1.176±0.00 0.259±0.23 0.367±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0004GC CIL_0004GC_0001 CGP 16:66844379-66895754
CIL_0004IP CIL_0004IP_0001 CGP 16:66878589-66918984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0004724 IEA magnesium-dependent protein serine/threonine phosphatase activity
GO:0004741 IEA [pyruvate dehydrogenase (lipoamide)] phosphatase activity
GO:0005739 IEA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006090 TAS pyruvate metabolic process
GO:0006470 IEA protein dephosphorylation
GO:0010510 TAS regulation of acetyl-CoA biosynthetic process from pyruvate
GO:0035970 IEA peptidyl-threonine dephosphorylation
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059588 Pdp2-201 protein_coding Mus_musculus 0 1504
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.00004 57
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.00004 57

Loading