C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004IP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172840-ENSG00000166589 CGP 9606 16:66878589-66918984
GeneTranscriptPositionBiotype
ENSG00000166589 (CDH16)
cadherin 16, KSP-cadherin 		ENST00000299752 (CDH16-001) 66908122-66918984 protein_coding
ENST00000394055 (CDH16-002) 66908122-66918917 protein_coding
ENST00000565235 (CDH16-008) 66915220-66918847 protein_coding
ENST00000565796 (CDH16-006) 66908129-66918848 protein_coding
ENST00000567009 (CDH16-009) 66913185-66916396 protein_coding
ENST00000567269 (CDH16-003) 66908129-66918884 nonsense_mediated_decay
ENST00000568632 (CDH16-004) 66908123-66918848 protein_coding
ENST00000568698 (CDH16-005) 66908133-66918852 nonsense_mediated_decay
ENST00000570262 (CDH16-007) 66908124-66918876 protein_coding
ENSG00000172840 (PDP2)
pyruvate dehyrogenase phosphatase catalytic subunit 2 		ENST00000311765 (PDP2-001) 66880361-66891096 protein_coding
ENST00000561704 (PDP2-009) 66880519-66884594 protein_coding
ENST00000566543 (PDP2-002) 66878589-66884739 protein_coding
ENST00000566776 (PDP2-005) 66880607-66885011 protein_coding
ENST00000566805 (PDP2-004) 66880549-66893000 nonsense_mediated_decay
ENST00000568398 (PDP2-003) 66880531-66884366 protein_coding
ENST00000568720 (PDP2-008) 66880582-66895754 processed_transcript
ENST00000568869 (PDP2-006) 66880515-66884749 protein_coding
CIL_0004IP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048371-ENSMUSG00000031881 CGP 10090 8:104591468-104624396
GeneTranscriptPositionBiotype
ENSMUSG00000031881 (Cdh16)
cadherin 16 		ENSMUST00000163783 (Cdh16-201) 104614141-104624396 protein_coding
ENSMUSG00000048371 (Pdp2)
pyruvate dehyrogenase phosphatase catalytic subunit 2 		ENSMUST00000059588 (Pdp2-201) 104591468-104596836 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IP_0001ENSG00000166589ENST00000299752ENST00000394055ENST00000565235ENST00000565796ENST00000567009ENST00000567269ENST00000568632ENST00000568698ENST00000570262ENSG00000172840ENST00000311765ENST00000561704ENST00000566543ENST00000566776ENST00000566805ENST00000568398ENST00000568720ENST00000568869CIL_0004IP_0002ENSMUSG00000031881ENSMUST00000163783ENSMUSG00000048371ENSMUST00000059588
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IP_0001ENSG00000166589ENST00000299752ENST00000565235ENST00000565796ENST00000567009ENST00000567269ENST00000568632ENST00000568698ENST00000570262ENSG00000172840ENST00000311765ENST00000566543ENST00000568720CIL_0004IP_0002ENSMUSG00000031881ENSMUST00000163783ENSMUSG00000048371ENSMUST00000059588
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166589 ENST00000299752 N/A N/A 17.859±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565235 N/A N/A N/A N/A 0.045±0.00 N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A
ENST00000565796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A
ENST00000567009 N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567269 0.037±0.00 N/A N/A N/A N/A N/A N/A 50.278±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568632 N/A N/A 7.591±0.00 N/A N/A N/A N/A 98.748±0.00 N/A N/A N/A 0.651±0.00 0.110±0.00 N/A
ENST00000568698 N/A 0.024±0.00 N/A 0.019±0.00 N/A 0.098±0.00 0.069±0.00 108.376±0.00 N/A N/A N/A 0.119±0.02 0.526±0.42 0.380±0.00
ENST00000570262 N/A N/A N/A N/A N/A N/A N/A 168.452±0.00 N/A N/A N/A 0.507±0.00 0.189±0.00 0.434±0.00
ENSG00000172840 ENST00000311765 N/A 0.251±0.00 0.781±0.00 1.380±0.52 2.179±0.00 0.858±0.00 0.068±0.00 N/A 0.801±0.00 1.176±0.00 0.259±0.23 0.367±0.01 N/A N/A
ENST00000561704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566543 N/A N/A N/A N/A N/A N/A 0.968±0.00 3.191±0.00 3.295±0.00 N/A 0.664±0.00 5.815±0.00 N/A N/A
ENST00000566776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.493±0.00 N/A N/A N/A
ENST00000568869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031881 ENSMUST00000163783 0.594±0.40 N/A 0.002±0.00 0.013±0.00 0.054±0.04 0.014±0.00 0.039±0.01 287.121±45.58 0.021±0.01 4.673±0.73 N/A 2.442±1.00 0.032±0.03 0.200±0.14
ENSMUSG00000048371 ENSMUST00000059588 3.168±2.57 8.544±0.28 N/A 1.123±0.00 5.093±2.29 7.397±0.62 1.793±0.37 4.642±0.82 5.040±1.66 2.171±0.89 1.062±0.20 5.506±1.88 0.603±0.23 0.751±0.26

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