C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312990 CDK4-201 ENSG00000135446 9606 - 12:57748262-57752332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312990
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312990 22.977±0.00 50.377±0.00 44.356±0.00 20.053±0.00 30.645±0.00 17.608±0.00 32.133±0.00 16.880±0.00 79.418±24.96 41.484±15.62 30.131±16.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KQ CIL_0002KQ_0002 CGP 12:57723761-57750211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120226 Cdk4-004 protein_coding Mus_musculus 0 813
ENSMUST00000006911 Cdk4-001 protein_coding Mus_musculus 0 473
ENSMUST00000140254 Cdk4-003 retained_intron Mus_musculus 0 453
ENSMUST00000133115 Cdk4-006 protein_coding Mus_musculus 0 444
ENSMUST00000142558 Cdk4-009 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000125682 Cdk4-005 protein_coding Mus_musculus 0 346
ENSMUST00000120079 Gm7158-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000123456 Cdk4-007 retained_intron Mus_musculus 0 196
ENSMUST00000118922 Gm13521-001 processed_pseudogene Mus_musculus 1e-21 108

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