C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142558 Cdk4-009 ENSMUSG00000006728 10090 + 10:127063609-127067002 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142558
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142558 58.555±1.69 50.390±6.54 41.416±2.84 90.762±23.28 27.894±3.02 28.784±3.05 23.224±0.00 39.507±5.83 54.759±6.85 36.768±7.41 13.730±3.26 76.192±13.59 68.058±25.39 8.866±2.93

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000307 IPI cyclin-dependent protein kinase holoenzyme complex
GO:0004672 IDA protein kinase activity
GO:0004693 IDA cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005923 IDA tight junction
GO:0006468 IDA protein phosphorylation
GO:0007165 IDA signal transduction
GO:0016301 IDA kinase activity
GO:0042127 IMP regulation of cell proliferation
GO:0051726 IDA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257904 CDK4-001 protein_coding Homo_sapiens 0 671
ENST00000312990 CDK4-201 protein_coding Homo_sapiens 0 407
ENST00000546489 CDK4-007 protein_coding Homo_sapiens 0 617
ENST00000547281 CDK4-009 protein_coding Homo_sapiens 0 536
ENST00000547992 TSPAN31-002 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000549606 CDK4-004 protein_coding Homo_sapiens 0 322
ENST00000550419 CDK4-008 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000551706 CDK4-002 retained_intron Homo_sapiens 0 407
ENST00000551800 CDK4-005 protein_coding Homo_sapiens 0 263
ENST00000551888 CDK4-013 processed_transcript Homo_sapiens 0 407
ENST00000552254 CDK4-011 protein_coding Homo_sapiens 0 291
ENST00000552388 CDK4-006 protein_coding Homo_sapiens 0 348
ENST00000552713 CDK4-014 retained_intron Homo_sapiens 0 322
ENST00000552862 CDK4-012 protein_coding Homo_sapiens 0 291
ENST00000553237 CDK4-003 nonsense_mediated_decay Homo_sapiens 0 1074

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