C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC16 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313050 SEC16A-202 ENSG00000148396 9606 - 9:136440097-136477689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000313050
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000313050 5.325±0.00 3.404±0.00 0.826±0.00 1.602±0.88 1.642±0.00 2.735±0.00 1.652±0.00 3.667±1.48 2.639±0.66 4.046±0.00 1.985±1.22 1.856±0.13 2.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X7 CIL_0003X7_0001 CGP 9:136428619-136483759

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0007029 IDA endoplasmic reticulum organization
GO:0015031 IEA protein transport
GO:0021762 IEP substantia nigra development
GO:0048208 IEA COPII vesicle coating

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091252 Sec16a-201 protein_coding Mus_musculus 0 3064
ENSMUST00000114082 Sec16a-001 protein_coding Mus_musculus 0 3064
ENSMUST00000156442 Sec16a-002 protein_coding Mus_musculus 0 1347
ENSMUST00000148306 Sec16a-004 processed_transcript Mus_musculus 0 200

Loading