C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC16 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114082 Sec16a-001 ENSMUSG00000026924 10090 - 2:26409431-26445214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114082 6.669±1.12 9.650±3.95 5.718±0.87 2.624±0.64 9.566±1.46 4.334±0.91 2.968±0.17 4.090±0.70 4.441±3.40 7.332±0.72 1.482±0.54 9.947±3.72 8.657±2.83 2.376±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X7 CIL_0003X7_0002 CGP 2:26396249-26445216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0048208 IEA COPII vesicle coating

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277537 SEC16A-004 protein_coding Homo_sapiens 0 822
ENST00000290037 SEC16A-201 protein_coding Homo_sapiens 0 3064
ENST00000313050 SEC16A-202 protein_coding Homo_sapiens 0 3064
ENST00000313084 SEC16A-002 protein_coding Homo_sapiens 0 303
ENST00000371706 SEC16A-001 protein_coding Homo_sapiens 0 3064
ENST00000431893 SEC16A-203 protein_coding Homo_sapiens 0 3064
ENST00000453963 SEC16A-005 protein_coding Homo_sapiens 0 1727

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