C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313432 ATP2A2-011 ENSG00000174437 9606 + 12:110345437-110351093 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverLungOvaryTestisENST00000313432
Transcript ID Adrenal Liver Lung Ovary Testis
ENST00000313432 4.979±0.00 8.927±0.00 12.840±0.00 10.131±1.70 16.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QG CIL_0001QG_0002 CGP 12:110124335-110351093
CIL_0001QF CIL_0001QF_0002 CGP 12:110280756-110403730

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031423 Atp2a2-201 protein_coding Mus_musculus 0 1559
ENSMUST00000177974 Atp2a2-202 protein_coding Mus_musculus 0 765
ENSMUST00000179939 Atp2a2-203 protein_coding Mus_musculus 0 353

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