C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313486 PITPNA-001 ENSG00000174238 9606 - 17:1517718-1562816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313486
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313486 4.580±0.00 4.858±1.66 8.629±0.00 8.083±4.42 3.035±2.34 9.831±0.00 3.946±0.75 2.363±0.79 2.655±2.30 5.584±4.95 5.063±0.25 23.406±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AE CIL_0006AE_0002 CGP 17:1494571-1562816
CIL_00060R CIL_00060R_0002 CGP 17:1517718-1628886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0006629 NAS lipid metabolic process
GO:0006810 IEA transport
GO:0007411 TAS axon guidance
GO:0007601 TAS visual perception
GO:0008289 IEA lipid binding
GO:0008525 TAS phosphatidylcholine transporter activity
GO:0008526 TAS phosphatidylinositol transporter activity
GO:0015914 TAS phospholipid transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143219 Pitpna-001 protein_coding Mus_musculus 0 2309
ENSMUST00000179521 Pitpna-202 protein_coding Mus_musculus 0 2276
ENSMUST00000179445 Pitpna-201 protein_coding Mus_musculus 0 1845
ENSMUST00000102509 Pitpna-002 nonsense_mediated_decay Mus_musculus 0 926
ENSMUST00000140841 Pitpna-003 retained_intron Mus_musculus 0 516
ENSMUST00000153768 Pitpna-004 processed_transcript Mus_musculus 0 307

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