C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of calcineurin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313806 RCAN1-001 ENSG00000159200 9606 - 21:34516484-34615142 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313806
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313806 27.168±0.00 12.916±0.00 19.307±15.02 14.235±11.62 6.112±4.34 24.990±0.00 21.273±0.00 41.679±0.00 11.506±0.00 4.705±3.93 3.791±2.37 10.234±0.36 7.834±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0001 VISTA 21:34142879-34745057
CIL_0007SX CIL_0007SX_0001 VISTA 21:34145397-34749042
CIL_0008OM CIL_0008OM_0001 VISTA 21:34146393-34747421
CIL_0008ZS CIL_0008ZS_0001 VISTA 21:34243666-34847364
CIL_00094R CIL_00094R_0001 VISTA 21:34258399-34859715
CIL_00078G CIL_00078G_0001 CGP 21:34446688-34615142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0007165 TAS signal transduction
GO:0007417 TAS central nervous system development
GO:0008015 TAS blood circulation
GO:0019722 IEA calcium-mediated signaling
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060005 Rcan1-202 protein_coding Mus_musculus 0 1051
ENSMUST00000023672 Rcan1-201 protein_coding Mus_musculus 0 776

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