C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: La ribonucleoprotein domain family, member 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316157 LARP4B-002 ENSG00000107929 9606 - 10:809542-885762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316157 8.239±0.00 9.135±0.00 1.276±0.00 3.754±1.92 5.715±2.40 3.601±0.61 4.654±3.56 4.916±2.72 2.569±0.37 5.989±2.24 5.781±3.76 11.594±6.66 6.391±2.06 12.241±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0010494 IDA cytoplasmic stress granule
GO:0016020 IDA membrane
GO:0042788 IDA polysomal ribosome
GO:0044822 IDA poly(A) RNA binding
GO:0045727 IMP positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188211 Larp4b-001 protein_coding Mus_musculus 0 2599
ENSMUST00000188939 Larp4b-003 protein_coding Mus_musculus 0 2139
ENSMUST00000091829 Larp4b-002 protein_coding Mus_musculus 0 1535
ENSMUST00000189330 Larp4b-005 retained_intron Mus_musculus 0 821
ENSMUST00000190041 Larp4b-008 protein_coding Mus_musculus 0 220

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