C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316170 GCNT2-001 ENSG00000111846 9606 + 6:10556007-10629368 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverMuscleOvaryPlacentaENST00000316170
Transcript ID Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENST00000316170 0.068±0.00 0.676±0.00 0.971±0.00 0.795±0.00 0.733±0.00 0.146±0.00 0.080±0.00 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097A CIL_00097A_0001 VISTA 6:10093642-10694839
CIL_00086X CIL_00086X_0001 VISTA 6:10107199-10709812
CIL_000382 CIL_000382_0001 CGP 6:10393186-10629368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0006486 IEA protein glycosylation
GO:0007275 TAS multicellular organismal development
GO:0008109 IEA N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069958 Gcnt2-202 protein_coding Mus_musculus 0 1133

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