C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316803 CABP1-001 ENSG00000157782 9606 + 12:120640552-120667311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000316803
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000316803 0.430±0.00 74.586±41.53 1.189±0.00 1.989±0.00 6.994±0.00 0.655±0.00 0.575±0.00 1.516±1.84 0.458±0.27 0.771±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0004857 TAS enzyme inhibitor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0008139 ISS nuclear localization sequence binding
GO:0009898 IEA cytoplasmic side of plasma membrane
GO:0010651 IEA negative regulation of cell communication by electrical coupling
GO:0014069 IDA postsynaptic density
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030425 IEA dendrite
GO:0031800 IEA type 3 metabotropic glutamate receptor binding
GO:0042308 ISS negative regulation of protein import into nucleus
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0043086 TAS negative regulation of catalytic activity
GO:0043234 IEA protein complex
GO:0044325 IEA ion channel binding
GO:0045211 IEA postsynaptic membrane
GO:0048306 IPI calcium-dependent protein binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:1901385 IEA regulation of voltage-gated calcium channel activity
GO:1901386 IEA negative regulation of voltage-gated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112113 Cabp1-004 protein_coding Mus_musculus 0 1277
ENSMUST00000031519 Cabp1-001 protein_coding Mus_musculus 0 1079
ENSMUST00000112109 Cabp1-006 protein_coding Mus_musculus 0 1064
ENSMUST00000112112 Cabp1-003 protein_coding Mus_musculus 0 828
ENSMUST00000145197 Cabp1-002 nonsense_mediated_decay Mus_musculus 0 791
ENSMUST00000151775 Cabp1-005 processed_transcript Mus_musculus 0 398
ENSDART00000018528 cabp5a-201 protein_coding Danio_rerio 6.00036e-42 176
ENSDART00000144067 cabp5a-001 protein_coding Danio_rerio 6.00036e-42 176

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