C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319653 FMN2-001 ENSG00000155816 9606 + 1:240091880-240475189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000319653
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000319653 0.026±0.00 0.099±0.00 0.027±0.00 7.827±6.53 0.049±0.02 1.056±0.00 0.755±0.00 0.076±0.00 0.028±0.00 0.414±0.22 0.029±0.01 0.617±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KG CIL_0006KG_0001 CGP 1:240014348-240612149

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IDA actin binding
GO:0005575 ND cellular_component
GO:0005730 IDA nucleolus
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005819 IEA spindle
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0005902 IEA microvillus
GO:0005938 ISS cell cortex
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007275 IEA multicellular organismal development
GO:0015031 IEA protein transport
GO:0015629 IDA actin cytoskeleton
GO:0016192 ISS vesicle-mediated transport
GO:0016344 IEA meiotic chromosome movement towards spindle pole
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0035556 IEA intracellular signal transduction
GO:0040038 ISS polar body extrusion after meiotic divisions
GO:0042177 IMP negative regulation of protein catabolic process
GO:0043066 IMP negative regulation of apoptotic process
GO:0046907 ISS intracellular transport
GO:0048477 ISS oogenesis
GO:0051017 IEA actin filament bundle assembly
GO:0051295 ISS establishment of meiotic spindle localization
GO:0051758 ISS homologous chromosome movement towards spindle pole involved in homologous chromosome segregation
GO:0070649 ISS formin-nucleated actin cable assembly
GO:0071456 IMP cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030039 Fmn2-201 protein_coding Mus_musculus 0 2276

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