C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155816-ENSG00000180875 CGP 9606 1:240014348-240612149
GeneTranscriptPositionBiotype
ENSG00000155816 (FMN2)
formin 2 		ENST00000319653 (FMN2-001) 240091880-240475189 protein_coding
ENST00000441342 (FMN2-005) 240245260-240329392 protein_coding
ENST00000447095 (FMN2-003) 240014348-240207187 protein_coding
ENST00000463398 (FMN2-004) 240235771-240330676 processed_transcript
ENST00000496950 (FMN2-002) 240472098-240474709 processed_transcript
ENST00000543681 (FMN2-201) 240457482-240474267 protein_coding
ENST00000545751 (FMN2-202) 240329144-240475183 protein_coding
ENSG00000180875 (GREM2)
gremlin 2, DAN family BMP antagonist 		ENST00000318160 (GREM2-001) 240489573-240612149 protein_coding
ENSG00000202041 (Y_RNA)
Y RNA 		ENST00000365171 (Y_RNA.1-527) 240154651-240154772 misc_RNA
ENSG00000223694 (ADH5P3)
alcohol dehydrogenase 5 (class III), chi polypeptide, pseudogene 3 		ENST00000433842 (ADH5P3-001) 240170155-240171291 processed_pseudogene
ENSG00000224359 (RP11-467I20.2)
 ENST00000457477 (RP11-467I20.2-001) 240530452-240530862 antisense
ENSG00000226014 (RP11-467I20.4)
 ENST00000425769 (RP11-467I20.4-001) 240549867-240550378 processed_pseudogene
ENSG00000228818 (RP11-567G24.1)
 ENST00000451892 (RP11-567G24.1-001) 240142670-240145389 processed_pseudogene
ENSG00000231440 (RP11-467I20.6)
 ENST00000428891 (RP11-467I20.6-001) 240588522-240590748 sense_intronic
ENSG00000233519 (RP11-177F11.1)
 ENST00000455599 (RP11-177F11.1-001) 240400671-240401123 antisense
ENSG00000252317 (Y_RNA)
Y RNA 		ENST00000516508 (Y_RNA.1-887) 240341385-240341477 misc_RNA
CIL_0006KG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028354-ENSMUSG00000050069 CGP 10090 1:174501825-174921819
GeneTranscriptPositionBiotype
ENSMUSG00000028354 (Fmn2)
formin 2 		ENSMUST00000030039 (Fmn2-201) 174501825-174822717 protein_coding
ENSMUSG00000050069 (Grem2)
gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis) 		ENSMUST00000055294 (Grem2-001) 174833785-174921819 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KG_0001ENSG00000155816ENST00000319653ENST00000441342ENST00000447095ENST00000463398ENST00000496950ENST00000543681ENST00000545751ENSG00000180875ENST00000318160ENSG00000202041ENST00000365171ENSG00000223694ENST00000433842ENSG00000224359ENST00000457477ENSG00000226014ENST00000425769ENSG00000228818ENST00000451892ENSG00000231440ENST00000428891ENSG00000233519ENST00000455599ENSG00000252317ENST00000516508CIL_0006KG_0002ENSMUSG00000028354ENSMUST00000030039ENSMUSG00000050069ENSMUST00000055294
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KG_0001ENSG00000155816ENST00000319653ENST00000441342ENST00000447095ENST00000463398ENST00000496950ENST00000543681ENST00000545751ENSG00000180875ENST00000318160ENSG00000202041ENST00000365171ENSG00000223694ENST00000433842ENSG00000224359ENST00000457477ENSG00000226014ENST00000425769ENSG00000228818ENST00000451892ENSG00000231440ENST00000428891ENSG00000233519ENST00000455599ENSG00000252317ENST00000516508CIL_0006KG_0002ENSMUSG00000028354ENSMUST00000030039ENSMUSG00000050069ENSMUST00000055294
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155816 ENST00000319653 0.026±0.00 0.099±0.00 0.027±0.00 7.827±6.53 0.049±0.02 1.056±0.00 N/A 0.755±0.00 0.076±0.00 0.028±0.00 N/A 0.414±0.22 0.029±0.01 0.617±0.16
ENST00000441342 0.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447095 N/A N/A N/A N/A 0.512±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000463398 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 N/A N/A N/A N/A
ENST00000496950 0.111±0.00 N/A 0.571±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A
ENST00000543681 N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A
ENST00000545751 0.124±0.00 0.039±0.00 0.069±0.00 4.323±0.00 N/A 1.335±0.00 N/A N/A N/A 0.051±0.00 N/A 0.535±0.00 0.081±0.03 0.719±0.00
ENSG00000180875 ENST00000318160 0.063±0.00 0.715±0.00 0.105±0.00 1.599±0.82 1.388±0.78 4.426±3.06 0.009±0.00 2.015±1.72 2.403±1.76 0.613±0.22 0.082±0.00 0.859±0.48 0.930±0.36 1.162±0.99
ENSG00000202041 ENST00000365171 N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00
ENSG00000223694 ENST00000433842 0.011±0.00 0.035±0.00 N/A 0.162±0.09 N/A 0.138±0.12 N/A 0.012±0.00 0.010±0.00 0.136±0.02 0.020±0.00 N/A N/A 0.067±0.03
ENSG00000224359 ENST00000457477 N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A
ENSG00000226014 ENST00000425769 N/A N/A N/A N/A 1.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.854±0.00
ENSG00000228818 ENST00000451892 0.017±0.00 0.025±0.00 0.018±0.00 0.121±0.04 0.026±0.00 0.018±0.00 0.017±0.00 0.019±0.00 0.006±0.00 0.012±0.00 0.081±0.00 N/A 0.018±0.00 0.017±0.01
ENSG00000231440 ENST00000428891 0.056±0.00 0.018±0.00 N/A 0.077±0.00 N/A N/A N/A 0.018±0.00 0.030±0.00 N/A N/A N/A N/A N/A
ENSG00000233519 ENST00000455599 0.218±0.00 0.552±0.00 N/A 0.119±0.00 0.443±0.00 0.304±0.00 0.209±0.00 0.111±0.00 N/A 0.257±0.00 0.936±0.00 N/A N/A 0.255±0.00
ENSG00000252317 ENST00000516508 N/A N/A N/A 1.364±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028354 ENSMUST00000030039 0.252±0.25 0.302±0.04 0.026±0.01 5.866±0.81 0.126±0.02 0.148±0.04 0.019±0.01 0.022±0.01 0.022±0.02 0.070±0.03 0.039±0.02 0.464±0.16 0.183±0.15 0.161±0.17
ENSMUSG00000050069 ENSMUST00000055294 3.219±2.45 0.829±0.11 6.945±0.14 2.414±1.77 4.456±0.96 18.157±1.33 0.056±0.01 2.707±0.59 1.076±0.97 20.662±2.72 1.543±0.48 23.563±9.18 6.883±5.04 0.061±0.04

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