C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab geranylgeranyltransferase, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319942 RABGGTB-001 ENSG00000137955 9606 + 1:75786201-75795079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319942
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319942 12.398±0.00 10.565±0.00 17.945±3.23 15.240±0.00 25.504±0.00 11.505±0.00 22.538±0.00 10.930±4.90 16.780±0.00 21.777±0.00 19.442±1.08 12.581±4.55 17.329±1.69

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004663 ISS Rab geranylgeranyltransferase activity
GO:0005515 IPI protein binding
GO:0005968 ISS Rab-protein geranylgeranyltransferase complex
GO:0006464 NAS cellular protein modification process
GO:0007601 TAS visual perception
GO:0008270 ISS zinc ion binding
GO:0017137 ISS Rab GTPase binding
GO:0018344 ISS protein geranylgeranylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089950 Rabggtb-201 protein_coding Mus_musculus 0 1112
ENSMUST00000167111 Rabggtb-202 protein_coding Mus_musculus 0 1103

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