C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 157
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319945 RNF157-010 ENSG00000141576 9606 - 17:76144340-76240308 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungMuscleOvaryENST00000319945
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary
ENST00000319945 0.783±0.00 4.930±0.00 0.149±0.00 0.165±0.00 0.208±0.00 0.787±0.00 0.384±0.00 2.729±0.00 4.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_0007CH CIL_0007CH_0001 CGP 17:76136333-76240373
CIL_0007BT CIL_0007BT_0001 CGP 17:76142453-76271299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106398 Rnf157-003 protein_coding Mus_musculus 0 2337
ENSMUST00000100202 Rnf157-001 protein_coding Mus_musculus 0 2041
ENSMUST00000149147 Rnf157-002 protein_coding Mus_musculus 0 1186
ENSMUST00000141229 Rnf157-004 processed_transcript Mus_musculus 0 628
ENSDART00000080166 RNF157-201 protein_coding Danio_rerio 0 547
ENSDART00000152973 RNF157-001 protein_coding Danio_rerio 0 547
ENSMUST00000142758 Rnf157-007 processed_transcript Mus_musculus 0 366
ENSMUST00000070658 Mgrn1-202 protein_coding Mus_musculus 0 254
ENSMUST00000023159 Mgrn1-201 protein_coding Mus_musculus 0 239
ENSMUST00000129202 Rnf157-008 processed_transcript Mus_musculus 0 226
ENSMUST00000150775 Rnf157-010 protein_coding Mus_musculus 0 219
ENSMUST00000149682 Rnf157-006 processed_transcript Mus_musculus 8.00141e-43 180
ENSMUST00000148763 Rnf157-009 processed_transcript Mus_musculus 1e-36 159

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