| Transcript ID | Muscle | Ovary | Placenta |
|---|---|---|---|
| ENST00000320619 | 4.356±2.90 | 9.743±0.00 | 6.635±0.10 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | zinc and ring finger 1, E3 ubiquitin protein ligase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000320619  |
ZNRF1-001 |
ENSG00000186187 |
9606 | + |
16:74999037-75108707  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002PJ | CIL_0002PJ_0001 | CGP | 16:74712955-75000173 |
| CIL_0002PH | CIL_0002PH_0001 | CGP | 16:74871367-75110994 |
| CIL_0004Y8 | CIL_0004Y8_0002 | CGP | 16:74999030-75116771 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | ISS | ubiquitin-protein transferase activity |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005764 | IEA | lysosome |
| GO:0005768 | IDA | endosome |
| GO:0005829 | IDA | cytosol |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016020 | IDA | membrane |
| GO:0016874 | IEA | ligase activity |
| GO:0030054 | IEA | cell junction |
| GO:0031410 | IEA | cytoplasmic vesicle |
| GO:0043161 | ISS | proteasome-mediated ubiquitin-dependent protein catabolic process |
| GO:0045202 | IEA | synapse |
| GO:0046872 | IEA | metal ion binding |
| GO:0070936 | ISS | protein K48-linked ubiquitination |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000168428
|
Znrf1-202 | protein_coding | Mus_musculus | 0 | 996 |
|
ENSMUST00000172856
|
Znrf1-001 | protein_coding | Mus_musculus | 0 | 996 |
|
ENSMUST00000095176
|
Znrf1-002 | protein_coding | Mus_musculus | 0 | 937 |
|
ENSMUST00000171182
|
Znrf1-203 | protein_coding | Mus_musculus | 0 | 856 |
|
ENSMUST00000173506
|
Znrf1-003 | protein_coding | Mus_musculus | 0 | 841 |
|
ENSMUST00000166859
|
Znrf1-201 | protein_coding | Mus_musculus | 0 | 632 |
|
ENSMUST00000173922
|
Znrf1-011 | nonsense_mediated_decay | Mus_musculus | 0 | 436 |
|
ENSMUST00000174333
|
Znrf1-008 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000174454
|
Znrf1-007 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000174376
|
Znrf1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 307 |
|
ENSMUST00000173726
|
Znrf1-012 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000173781
|
Znrf1-010 | protein_coding | Mus_musculus | 0 | 274 |
