C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and immunoglobulin-like domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320743 LRIG3-002 ENSG00000139263 9606 - 12:58872149-58920522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320743
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320743 0.936±0.00 1.202±0.00 0.221±0.00 1.937±0.00 3.055±1.29 0.351±0.13 1.756±0.00 1.696±1.08 0.628±0.00 0.222±0.00 3.344±1.41 1.688±0.30 1.530±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V1 CIL_0007V1_0001 VISTA 12:58667849-59270737
CIL_0008TE CIL_0008TE_0001 VISTA 12:58766409-59368586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0032474 IEA otolith morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074807 Lrig3-201 protein_coding Mus_musculus 0 3395

Loading