C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulocalbin 2, EF-hand calcium binding domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320963 RCN2-002 ENSG00000117906 9606 + 15:76931738-76949860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320963
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320963 5.325±0.00 3.946±0.00 0.944±0.00 19.898±0.00 5.202±2.08 4.446±3.42 2.969±2.49 9.071±7.93 2.605±1.00 3.187±1.32 1.367±1.19 12.609±11.38 14.369±6.95 40.876±18.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114276 Rcn2-001 protein_coding Mus_musculus 0 1242
ENSMUST00000147842 Rcn2-002 nonsense_mediated_decay Mus_musculus 0 1242
ENSMUST00000144869 Rcn2-004 retained_intron Mus_musculus 2e-36 158

Loading