C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322060 PUS1-003 ENSG00000177192 9606 + 12:131929242-131941983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000322060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000322060 1.852±0.00 9.330±0.00 0.578±0.00 1.603±0.00 2.769±1.10 3.266±0.00 4.819±0.00 3.848±0.00 7.827±6.45 4.393±0.00 8.067±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170468 Pus1-201 protein_coding Mus_musculus 0 1074
ENSMUST00000031481 Pus1-003 protein_coding Mus_musculus 0 1074
ENSMUST00000031483 Pus1-001 protein_coding Mus_musculus 0 1074
ENSMUST00000112426 Pus1-004 protein_coding Mus_musculus 0 872
ENSMUST00000086643 Pus1-002 protein_coding Mus_musculus 0 870
ENSMUST00000136483 Pus1-005 protein_coding Mus_musculus 0 346
ENSMUST00000149208 Pus1-006 protein_coding Mus_musculus 0 206

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