C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EGF-like, fibronectin type III and laminin G domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322350 EGFLAM-001 ENSG00000164318 9606 + 5:38258409-38465021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000322350
Transcript ID Adipose Bladder Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000322350 0.879±0.00 0.063±0.00 1.589±1.15 1.315±0.00 1.624±0.86 0.668±0.00 1.516±0.00 5.103±3.74 10.648±2.50 1.975±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0030054 IEA cell junction
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058593 Egflam-002 protein_coding Mus_musculus 0 3269
ENSMUST00000096494 Egflam-001 protein_coding Mus_musculus 0 3169
ENSMUST00000160207 Egflam-003 nonsense_mediated_decay Mus_musculus 0 3110
ENSMUST00000160273 Egflam-004 retained_intron Mus_musculus 0 2270
ENSMUST00000162105 Egflam-006 processed_transcript Mus_musculus 0 195

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