C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 335
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322927 ZNF335-001 ENSG00000198026 9606 - 20:45948653-45972172 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322927
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322927 2.336±0.00 3.248±0.00 1.744±0.86 1.212±0.82 2.153±0.00 1.422±1.31 2.397±2.05 1.581±0.00 3.014±2.42 5.651±0.00 4.444±0.47 3.092±0.54 4.399±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GO CIL_0006GO_0001 CGP 20:45934628-45972172
CIL_0007BJ CIL_0007BJ_0001 CGP 20:45948653-46016561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000979 IEA RNA polymerase II core promoter sequence-specific DNA binding
GO:0001701 IEA in utero embryonic development
GO:0002052 ISS positive regulation of neuroblast proliferation
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 IMP brain development
GO:0010468 IEA regulation of gene expression
GO:0021895 IEA cerebral cortex neuron differentiation
GO:0035097 IDA histone methyltransferase complex
GO:0040029 IMP regulation of gene expression, epigenetic
GO:0044212 ISS transcription regulatory region DNA binding
GO:0046872 IEA metal ion binding
GO:0048812 ISS neuron projection morphogenesis
GO:0048854 IEA brain morphogenesis
GO:0050671 IMP positive regulation of lymphocyte proliferation
GO:0050767 IEA regulation of neurogenesis
GO:0050769 IMP positive regulation of neurogenesis
GO:0051569 IEA regulation of histone H3-K4 methylation
GO:0080182 IMP histone H3-K4 trimethylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041361 Zfp335-001 protein_coding Mus_musculus 0 4148
ENSMUST00000183830 Zfp335-003 nonsense_mediated_decay Mus_musculus 0 2290
ENSMUST00000041643 Pcif1-001 protein_coding Mus_musculus 0 316

Loading