C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 37 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324849 VPS37A-001 ENSG00000155975 9606 + 8:17246571-17298024 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324849
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324849 3.796±0.00 2.816±0.00 6.372±0.00 3.443±0.75 5.609±0.00 3.161±1.30 4.859±0.00 2.454±0.00 4.602±0.00 6.643±0.00 4.002±0.44 4.037±0.25 6.533±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VB CIL_0001VB_0001 CGP 8:17156029-17246878
CIL_0001T6 CIL_0001T6_0001 CGP 8:17224964-17302427
CIL_00006T CIL_00006T_0002 CGP 8:17246571-17413528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0008219 IEA cell death
GO:0010008 TAS endosome membrane
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0019068 TAS virion assembly
GO:0019082 TAS viral protein processing
GO:0043162 IC ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0061024 TAS membrane organization
GO:0075733 TAS intracellular transport of virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098817 Vps37a-201 protein_coding Mus_musculus 0 1722

Loading