C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000325844 MRPS11-001 ENSG00000181991 9606 + 15:88467453-88480773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000325844
Transcript ID Adipose Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000325844 0.770±0.00 1.213±0.00 0.582±0.35 0.649±0.51 1.477±0.00 0.221±0.00 0.450±0.00 1.001±0.16 1.277±0.00 0.964±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011G CIL_00011G_0001 CGP 15:88459476-88480773
CIL_00011H CIL_00011H_0001 CGP 15:88467453-88546675

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 ISS mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0042769 NAS DNA damage response, detection of DNA damage
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032840 Mrps11-001 protein_coding Mus_musculus 0 477
ENSMUST00000133553 Mrps11-002 processed_transcript Mus_musculus 0 470
ENSMUST00000136001 Mrps11-006 processed_transcript Mus_musculus 0 259
ENSMUST00000123706 Mrps11-003 retained_intron Mus_musculus 0 255

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