C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 16 open reading frame 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327237 C16orf58-001 ENSG00000140688 9606 - 16:31489489-31508413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327237
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327237 12.664±0.00 12.141±0.00 7.753±4.59 11.631±0.00 13.346±0.00 1.783±1.07 17.317±12.59 23.210±0.00 9.228±0.00 1.639±0.00 19.028±14.24 24.883±13.05 14.495±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0001 VISTA 16:31421736-32023283
CIL_000708 CIL_000708_0001 CGP 16:31471585-31490860
CIL_00035J CIL_00035J_0001 CGP 16:31483002-31509309

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033044 BC017158-001 protein_coding Mus_musculus 0 1391
ENSMUST00000126263 BC017158-004 nonsense_mediated_decay Mus_musculus 0 1304
ENSMUST00000155177 BC017158-003 retained_intron Mus_musculus 0 937
ENSMUST00000154003 BC017158-002 retained_intron Mus_musculus 0 747
ENSMUST00000124216 BC017158-007 retained_intron Mus_musculus 0 374
ENSMUST00000147091 BC017158-005 retained_intron Mus_musculus 0 326
ENSMUST00000137677 BC017158-006 protein_coding Mus_musculus 0 217

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