C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cDNA sequence BC017158
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154003 BC017158-002 ENSMUSG00000030780 10090 - 7:128272107-128298109 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000154003
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154003 5.749±3.15 1.886±0.25 1.099±0.01 2.154±1.01 5.118±0.43 0.652±0.16 3.134±1.29 4.102±0.31 0.226±0.00 4.794±1.89 1.454±0.48 0.910±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000708 CIL_000708_0002 CGP 7:128246812-128272430
CIL_00035J CIL_00035J_0002 CGP 7:128265657-128298170

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327237 C16orf58-001 protein_coding Homo_sapiens 0 747
ENST00000430477 C16orf58-201 protein_coding Homo_sapiens 0 747
ENST00000541442 C16orf58-005 retained_intron Homo_sapiens 0 375
ENST00000564807 C16orf58-007 protein_coding Homo_sapiens 0 481
ENST00000566148 C16orf58-010 retained_intron Homo_sapiens 0 508
ENST00000567578 C16orf58-009 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000567994 C16orf58-002 protein_coding Homo_sapiens 0 678
ENST00000568491 C16orf58-006 retained_intron Homo_sapiens 0 412
ENST00000570164 C16orf58-004 protein_coding Homo_sapiens 0 747

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