C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenophosphate synthetase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327347 SEPHS1-001 ENSG00000086475 9606 - 10:13317424-13348297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327347
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327347 4.601±0.00 5.143±0.00 0.854±0.00 7.599±0.00 3.675±0.02 1.341±0.00 6.089±0.00 1.408±0.00 1.125±0.47 3.008±0.00 5.027±2.81 3.528±0.97 5.904±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0001 VISTA 10:13045564-13647145
CIL_00062N CIL_00062N_0002 CGP 10:13317424-13528974

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004756 IEA selenide, water dikinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005525 TAS GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006464 TAS cellular protein modification process
GO:0016310 IEA phosphorylation
GO:0031965 IDA nuclear membrane
GO:0042803 IDA protein homodimerization activity
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027973 Sephs1-001 protein_coding Mus_musculus 0 2763
ENSMUST00000115019 Sephs1-002 protein_coding Mus_musculus 0 2560
ENSMUST00000140045 Sephs1-004 processed_transcript Mus_musculus 0 675
ENSMUST00000144565 Sephs1-003 processed_transcript Mus_musculus 0 379

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