C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: selenophosphate synthetase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140045 Sephs1-004 ENSMUSG00000026662 10090 + 2:4884384-4905533 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000140045
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000140045 5.694±0.00 26.810±0.00 12.291±6.52 3.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000965 CIL_000965_0002 VISTA 2:4287585-4888762
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327347 SEPHS1-001 protein_coding Homo_sapiens 0 675
ENST00000378614 SEPHS1-002 protein_coding Homo_sapiens 0 588
ENST00000413411 SEPHS1-003 protein_coding Homo_sapiens 0 298
ENST00000425947 SEPHS1-004 protein_coding Homo_sapiens 0 241
ENST00000426891 SEPHS1P1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000443084 SEPHS1P6-001 processed_pseudogene Homo_sapiens 0 575
ENST00000446112 SEPHS1P4-001 processed_pseudogene Homo_sapiens 0 610
ENST00000494329 SEPHS1-005 processed_transcript Homo_sapiens 0 298
ENST00000545675 SEPHS1-201 protein_coding Homo_sapiens 0 675
ENST00000557145 RP11-164C12.1-001 processed_pseudogene Homo_sapiens 0 294

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