C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transport and golgi organization 2 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327374 TANGO2-003 ENSG00000183597 9606 + 22:20021108-20065926 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaENST00000327374
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta
ENST00000327374 1.300±0.00 2.543±0.00 2.664±0.00 3.678±0.00 1.426±0.00 0.481±0.00 3.373±0.00 1.695±0.00 2.346±0.89 2.565±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487
CIL_0006HK CIL_0006HK_0002 CGP 22:19969896-20065926

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183630 TANGO2-001 protein_coding Mus_musculus 0 856
ENSMUST00000115628 Tango2-001 protein_coding Mus_musculus 0 856
ENSMUST00000184457 TANGO2-002 nonsense_mediated_decay Mus_musculus 0 778
ENSMUST00000128580 Tango2-002 nonsense_mediated_decay Mus_musculus 0 778
ENSMUST00000184324 TANGO2-004 nonsense_mediated_decay Mus_musculus 0 446
ENSMUST00000125287 Tango2-004 nonsense_mediated_decay Mus_musculus 0 446
ENSMUST00000184631 TANGO2-010 protein_coding Mus_musculus 0 438
ENSMUST00000130752 Tango2-010 protein_coding Mus_musculus 0 438
ENSMUST00000184698 TANGO2-006 retained_intron Mus_musculus 0 348
ENSMUST00000145203 Tango2-006 retained_intron Mus_musculus 0 348
ENSMUST00000185024 TANGO2-005 retained_intron Mus_musculus 0 220
ENSMUST00000150152 Tango2-005 retained_intron Mus_musculus 0 220
ENSMUST00000183496 TANGO2-003 retained_intron Mus_musculus 7e-23 113
ENSMUST00000134385 Tango2-003 retained_intron Mus_musculus 7e-23 113

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