C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15920
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118998 Gm15920-001 ENSMUSG00000080893 10090 + 5:130188395-130188796 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118998
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118998 20.106±4.17 5.361±1.25 1.211±0.61 2.008±0.69 8.869±2.50 6.013±2.13 35.440±2.58 25.214±7.91 4.781±4.62 5.503±2.55 1.115±0.83 8.209±6.43 11.929±15.48 15.227±5.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UP CIL_0005UP_0002 CGP 5:130144861-130214342
CIL_000256 CIL_000256_0002 CGP 5:130171798-130243765

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327772 NDUFA12-001 protein_coding Homo_sapiens 0 435
ENST00000538372 NDUFA12-006 retained_intron Homo_sapiens 0 296
ENST00000546788 NDUFA12-009 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000550187 NDUFA12-007 processed_transcript Homo_sapiens 0 296
ENST00000551991 NDUFA12-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000600438 CTD-2623H2.7-001 processed_pseudogene Homo_sapiens 3e-23 111

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