C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mex-3 RNA binding family member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329713 MEX3B-001 ENSG00000183496 9606 - 15:82041778-82046141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329713 0.775±0.00 0.204±0.00 0.039±0.00 0.734±0.11 0.375±0.23 0.685±0.34 0.350±0.19 0.117±0.06 0.501±0.42 0.211±0.19 0.214±0.07 1.526±1.32 1.659±0.63 23.825±7.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071F CIL_00071F_0002 CGP 15:81331217-82046141
CIL_0008DT CIL_0008DT_0001 VISTA 15:81587611-82189547
CIL_0000Y4 CIL_0000Y4_0002 CGP 15:82041778-82262763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 ISS protein phosphorylation
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding
GO:0046777 ISS protein autophosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082237 Mex3b-201 protein_coding Mus_musculus 0 4196
ENSDART00000101537 mex3b-201 protein_coding Danio_rerio 0 616
ENSMUST00000062946 Mex3d-201 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000105350 Mex3d-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000123141 Mex3d-002 protein_coding Mus_musculus 0.0000000002 73

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