C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052723-ENSDARG00000058369 CGP 7955 7:12442784-12884593
GeneTranscriptPositionBiotype
ENSDARG00000052723 (TMC3)
transmembrane channel-like 3 		ENSDART00000102468 (TMC3-201) 12442784-12490653 protein_coding
ENSDARG00000058369 (mex3b)
mex-3 homolog B (C. elegans) 		ENSDART00000101537 (mex3b-201) 12880714-12884593 protein_coding
CIL_00071F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188869-ENSG00000183496 CGP 9606 15:81331217-82046141
GeneTranscriptPositionBiotype
ENSG00000183496 (MEX3B)
mex-3 RNA binding family member B 		ENST00000329713 (MEX3B-001) 82041778-82046141 protein_coding
ENST00000558133 (MEX3B-002) 82041787-82046119 protein_coding
ENSG00000188869 (TMC3)
transmembrane channel-like 3 		ENST00000359440 (TMC3-001) 81331217-81374213 protein_coding
ENST00000558726 (TMC3-004) 81331217-81374213 protein_coding
ENST00000559982 (TMC3-002) 81337642-81374156 retained_intron
ENSG00000259343 (RP11-761I4.3)
 ENST00000559277 (RP11-761I4.3-004) 81341648-81343150 antisense
ENST00000559781 (RP11-761I4.3-001) 81324377-81361990 antisense
ENST00000560851 (RP11-761I4.3-003) 81331911-81362037 antisense
ENST00000560973 (RP11-761I4.3-002) 81324438-81341710 antisense
ENSG00000259372 (CTD-2240J17.1)
 ENST00000558086 (CTD-2240J17.1-002) 81410517-81411267 lincRNA
ENST00000559698 (CTD-2240J17.1-001) 81410605-81419127 lincRNA
ENSG00000259445 (RP11-276M12.1)
 ENST00000559299 (RP11-276M12.1-001) 81953303-81995666 lincRNA
ENSG00000259543 (CTD-2034I4.1)
 ENST00000559211 (CTD-2034I4.1-001) 81427448-81755217 lincRNA
ENSG00000259594 (CTD-2034I4.2)
 ENST00000558141 (CTD-2034I4.2-001) 81554003-81696780 lincRNA
ENST00000558153 (CTD-2034I4.2-002) 81652232-81688545 lincRNA
ENSG00000259610 (RP11-499F3.1)
 ENST00000559428 (RP11-499F3.1-001) 81633887-81642190 lincRNA
ENSG00000259622 (RP11-597K23.1)
 ENST00000558741 (RP11-597K23.1-001) 82010212-82010607 processed_pseudogene
ENSG00000259692 (RP11-499F3.2)
 ENST00000560054 (RP11-499F3.2-002) 81660482-81798124 lincRNA
ENST00000560097 (RP11-499F3.2-001) 81660482-81871125 lincRNA
ENSG00000273920 (RP11-761I4.5)
 ENST00000621471 (RP11-761I4.5-001) 81335577-81336119 antisense
ENSG00000275995 (CTD-2240J17.4)
 ENST00000619665 (CTD-2240J17.4-001) 81403026-81403570 lincRNA
ENSG00000278029 (CTD-2240J17.2)
 ENST00000620493 (CTD-2240J17.2-001) 81392759-81393384 lincRNA
ENSG00000278448 (CTD-2240J17.3)
 ENST00000612811 (CTD-2240J17.3-001) 81393625-81394082 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071F_0001ENSDARG00000052723ENSDART00000102468ENSDARG00000058369ENSDART00000101537CIL_00071F_0002ENSG00000183496ENST00000329713ENST00000558133ENSG00000188869ENST00000359440ENST00000558726ENST00000559982ENSG00000259343ENST00000559277ENST00000559781ENST00000560851ENST00000560973ENSG00000259372ENST00000558086ENST00000559698ENSG00000259445ENST00000559299ENSG00000259543ENST00000559211ENSG00000259594ENST00000558141ENST00000558153ENSG00000259610ENST00000559428ENSG00000259622ENST00000558741ENSG00000259692ENST00000560054ENST00000560097ENSG00000273920ENST00000621471ENSG00000275995ENST00000619665ENSG00000278029ENST00000620493ENSG00000278448ENST00000612811
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071F_0001ENSDARG00000052723ENSDART00000102468ENSDARG00000058369ENSDART00000101537CIL_00071F_0002ENSG00000183496ENST00000329713ENST00000558133ENSG00000188869ENST00000359440ENST00000558726ENST00000559982ENSG00000259343ENST00000559277ENST00000559781ENST00000560851ENST00000560973ENSG00000259372ENST00000558086ENST00000559698ENSG00000259445ENST00000559299ENSG00000259543ENST00000559211ENSG00000259594ENST00000558141ENST00000558153ENSG00000259610ENST00000559428ENSG00000259622ENST00000558741ENSG00000259692ENST00000560054ENST00000560097ENSG00000273920ENST00000621471ENSG00000275995ENST00000619665ENSG00000278029ENST00000620493ENSG00000278448ENST00000612811
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052723 ENSDART00000102468 N/A N/A N/A 0.094±0.00 N/A N/A 0.039±0.01 0.097±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000058369 ENSDART00000101537 N/A N/A N/A 11.511±8.70 N/A N/A 1.373±0.34 0.913±0.13 0.038±0.00 N/A 2.035±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183496 ENST00000329713 0.775±0.00 0.204±0.00 0.039±0.00 0.734±0.11 0.375±0.23 0.685±0.34 0.350±0.19 0.117±0.06 0.501±0.42 0.211±0.19 0.214±0.07 1.526±1.32 1.659±0.63 23.825±7.07
ENST00000558133 0.164±0.00 0.235±0.00 N/A N/A 0.160±0.07 0.282±0.00 0.071±0.00 0.138±0.00 N/A N/A N/A 0.252±0.17 0.168±0.00 N/A
ENSG00000188869 ENST00000359440 0.039±0.00 0.060±0.00 N/A 0.057±0.01 0.020±0.00 0.154±0.00 0.017±0.00 0.046±0.00 0.135±0.00 0.022±0.00 N/A 0.030±0.01 0.056±0.01 0.266±0.13
ENST00000558726 0.039±0.00 0.060±0.00 N/A 0.048±0.00 0.020±0.00 0.147±0.00 0.014±0.00 0.045±0.00 N/A 0.021±0.00 N/A 0.029±0.02 0.055±0.01 0.137±0.00
ENST00000559982 N/A N/A N/A N/A 0.088±0.06 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259343 ENST00000559277 N/A N/A N/A N/A N/A N/A N/A N/A 0.589±0.00 N/A N/A 0.342±0.00 N/A N/A
ENST00000559781 N/A N/A N/A 0.098±0.05 0.084±0.00 0.548±0.00 N/A N/A 0.252±0.00 0.280±0.00 N/A 0.415±0.32 0.197±0.00 N/A
ENST00000560851 N/A N/A N/A 0.258±0.00 0.426±0.00 N/A 0.127±0.00 2.642±0.00 0.229±0.00 0.535±0.00 N/A 0.693±0.00 0.194±0.00 0.650±0.00
ENST00000560973 N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259372 ENST00000558086 N/A 0.018±0.00 N/A 0.018±0.00 0.237±0.00 0.056±0.00 N/A 0.145±0.00 0.124±0.00 N/A N/A 0.058±0.00 N/A 0.103±0.02
ENST00000559698 N/A N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A 0.419±0.08
ENSG00000259445 ENST00000559299 0.083±0.00 0.130±0.00 N/A N/A 0.627±0.44 N/A 0.411±0.28 N/A 0.341±0.00 0.752±0.28 N/A 0.102±0.00 0.191±0.10 0.403±0.01
ENSG00000259543 ENST00000559211 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259594 ENST00000558141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00
ENST00000558153 N/A N/A N/A 0.023±0.00 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.102±0.00 0.037±0.00 0.104±0.03
ENSG00000259610 ENST00000559428 N/A N/A N/A N/A N/A 0.132±0.00 N/A 0.165±0.00 N/A N/A N/A N/A 0.131±0.01 0.038±0.00
ENSG00000259622 ENST00000558741 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A 0.126±0.00
ENSG00000259692 ENST00000560054 N/A N/A N/A N/A 0.387±0.00 N/A 0.269±0.00 N/A N/A N/A N/A N/A N/A 0.213±0.00
ENST00000560097 0.165±0.00 N/A N/A 0.232±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.573±0.26 0.091±0.04
ENSG00000273920 ENST00000621471 0.229±0.00 N/A N/A 0.032±0.00 0.109±0.00 N/A N/A 0.570±0.00 0.026±0.00 N/A N/A 0.203±0.03 0.128±0.00 0.076±0.00
ENSG00000275995 ENST00000619665 N/A 0.155±0.00 N/A N/A 0.139±0.00 0.027±0.00 N/A 0.102±0.00 0.286±0.00 N/A N/A 0.281±0.06 0.118±0.03 0.316±0.00
ENSG00000278029 ENST00000620493 N/A 0.079±0.00 N/A 0.073±0.01 0.724±0.69 0.685±0.50 N/A 0.092±0.00 0.250±0.15 N/A N/A 0.224±0.10 0.055±0.01 0.216±0.03
ENSG00000278448 ENST00000612811 N/A N/A N/A 0.219±0.00 0.023±0.00 N/A N/A N/A 0.595±0.37 N/A N/A 0.329±0.30 0.087±0.00 0.095±0.04

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