C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008DT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1494 VISTA 9606 15:81587611-82189547
GeneTranscriptPositionBiotype
ENSG00000140598 (EFTUD1)
elongation factor Tu GTP binding domain containing 1 		ENST00000268206 (EFTUD1-002) 82130230-82262763 protein_coding
ENST00000359445 (EFTUD1-001) 82130233-82262714 protein_coding
ENST00000557844 (EFTUD1-004) 82261688-82262661 protein_coding
ENST00000557939 (EFTUD1-006) 82238308-82252759 protein_coding
ENST00000558974 (EFTUD1-005) 82261729-82262464 protein_coding
ENST00000559429 (EFTUD1-008) 82157466-82163957 retained_intron
ENST00000560095 (EFTUD1-009) 82214783-82215663 processed_transcript
ENST00000561331 (EFTUD1-007) 82227466-82233774 processed_transcript
ENST00000561340 (EFTUD1-010) 82152157-82160070 processed_transcript
ENST00000561389 (EFTUD1-003) 82238454-82262734 nonsense_mediated_decay
ENSG00000183496 (MEX3B)
mex-3 RNA binding family member B 		ENST00000329713 (MEX3B-001) 82041778-82046141 protein_coding
ENST00000558133 (MEX3B-002) 82041787-82046119 protein_coding
ENSG00000259445 (RP11-276M12.1)
 ENST00000559299 (RP11-276M12.1-001) 81953303-81995666 lincRNA
ENSG00000259518 (RP11-597K23.2)
 ENST00000557838 (RP11-597K23.2-003) 82088691-82091980 lincRNA
ENST00000558082 (RP11-597K23.2-001) 82088594-82097694 lincRNA
ENST00000559788 (RP11-597K23.2-002) 82088633-82095707 lincRNA
ENSG00000259543 (CTD-2034I4.1)
 ENST00000559211 (CTD-2034I4.1-001) 81427448-81755217 lincRNA
ENSG00000259594 (CTD-2034I4.2)
 ENST00000558141 (CTD-2034I4.2-001) 81554003-81696780 lincRNA
ENST00000558153 (CTD-2034I4.2-002) 81652232-81688545 lincRNA
ENSG00000259610 (RP11-499F3.1)
 ENST00000559428 (RP11-499F3.1-001) 81633887-81642190 lincRNA
ENSG00000259622 (RP11-597K23.1)
 ENST00000558741 (RP11-597K23.1-001) 82010212-82010607 processed_pseudogene
ENSG00000259692 (RP11-499F3.2)
 ENST00000560054 (RP11-499F3.2-002) 81660482-81798124 lincRNA
ENST00000560097 (RP11-499F3.2-001) 81660482-81871125 lincRNA
CIL_0008DT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1494 VISTA 10090 7:82760305-83362370
GeneTranscriptPositionBiotype
ENSMUSG00000038563 (Eftud1)
elongation factor Tu GTP binding domain containing 1 		ENSMUST00000039881 (Eftud1-001) 82648641-82777852 protein_coding
ENSMUST00000125245 (Eftud1-002) 82648629-82698684 retained_intron
ENSMUST00000141726 (Eftud1-003) 82648614-82674555 protein_coding
ENSMUST00000153265 (Eftud1-004) 82670229-82674544 processed_transcript
ENSMUST00000179489 (Eftud1-201) 82648614-82777852 protein_coding
ENSMUSG00000053528 (A530021J07Rik)
Riken cDNA A530021J07 gene 		ENSMUST00000066005 (A530021J07Rik-201) 83148644-83155922 protein_coding
ENSMUSG00000057706 (Mex3b)
mex3 homolog B (C. elegans) 		ENSMUST00000082237 (Mex3b-201) 82867333-82871563 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DT_0001ENSG00000140598ENST00000268206ENST00000359445ENST00000557844ENST00000557939ENST00000558974ENST00000559429ENST00000560095ENST00000561331ENST00000561340ENST00000561389ENSG00000183496ENST00000329713ENST00000558133ENSG00000259445ENST00000559299ENSG00000259518ENST00000557838ENST00000558082ENST00000559788ENSG00000259543ENST00000559211ENSG00000259594ENST00000558141ENST00000558153ENSG00000259610ENST00000559428ENSG00000259622ENST00000558741ENSG00000259692ENST00000560054ENST00000560097CIL_0008DT_0002ENSMUSG00000038563ENSMUST00000039881ENSMUST00000125245ENSMUST00000141726ENSMUST00000153265ENSMUST00000179489ENSMUSG00000053528ENSMUST00000066005ENSMUSG00000057706ENSMUST00000082237
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DT_0001ENSG00000140598ENST00000268206ENST00000359445ENST00000561331ENSG00000183496ENST00000329713ENST00000558133ENSG00000259445ENST00000559299ENSG00000259518ENST00000557838ENST00000558082ENST00000559788ENSG00000259543ENST00000559211ENSG00000259594ENST00000558141ENST00000558153ENSG00000259610ENST00000559428ENSG00000259622ENST00000558741ENSG00000259692ENST00000560054ENST00000560097CIL_0008DT_0002ENSMUSG00000038563ENSMUST00000039881ENSMUST00000125245ENSMUST00000141726ENSMUST00000153265ENSMUST00000179489ENSMUSG00000053528ENSMUST00000066005ENSMUSG00000057706ENSMUST00000082237
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140598 ENST00000268206 0.404±0.00 0.348±0.00 1.499±0.00 0.754±0.24 1.916±0.56 0.902±0.00 1.597±0.15 1.598±0.12 1.218±0.91 2.056±0.78 1.073±0.38 1.370±0.47 2.176±0.61 2.019±0.36
ENST00000359445 1.199±0.00 1.324±0.00 N/A 0.447±0.00 N/A 0.681±0.00 N/A N/A 0.389±0.00 0.638±0.00 0.585±0.00 2.428±0.00 1.695±0.00 1.379±0.54
ENST00000557844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561331 2.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183496 ENST00000329713 0.775±0.00 0.204±0.00 0.039±0.00 0.734±0.11 0.375±0.23 0.685±0.34 0.350±0.19 0.117±0.06 0.501±0.42 0.211±0.19 0.214±0.07 1.526±1.32 1.659±0.63 23.825±7.07
ENST00000558133 0.164±0.00 0.235±0.00 N/A N/A 0.160±0.07 0.282±0.00 0.071±0.00 0.138±0.00 N/A N/A N/A 0.252±0.17 0.168±0.00 N/A
ENSG00000259445 ENST00000559299 0.083±0.00 0.130±0.00 N/A N/A 0.627±0.44 N/A 0.411±0.28 N/A 0.341±0.00 0.752±0.28 N/A 0.102±0.00 0.191±0.10 0.403±0.01
ENSG00000259518 ENST00000557838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.346±0.93
ENST00000558082 N/A 0.013±0.00 0.022±0.00 0.030±0.00 0.008±0.00 N/A N/A N/A 0.011±0.00 0.003±0.00 N/A 0.009±0.00 0.013±0.00 0.240±0.14
ENST00000559788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.397±0.00
ENSG00000259543 ENST00000559211 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259594 ENST00000558141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00
ENST00000558153 N/A N/A N/A 0.023±0.00 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.102±0.00 0.037±0.00 0.104±0.03
ENSG00000259610 ENST00000559428 N/A N/A N/A N/A N/A 0.132±0.00 N/A 0.165±0.00 N/A N/A N/A N/A 0.131±0.01 0.038±0.00
ENSG00000259622 ENST00000558741 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A 0.126±0.00
ENSG00000259692 ENST00000560054 N/A N/A N/A N/A 0.387±0.00 N/A 0.269±0.00 N/A N/A N/A N/A N/A N/A 0.213±0.00
ENST00000560097 0.165±0.00 N/A N/A 0.232±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.573±0.26 0.091±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038563 ENSMUST00000039881 1.991±0.72 0.888±0.04 2.117±0.36 2.096±0.45 1.186±0.20 1.840±0.30 0.644±0.13 1.757±0.39 1.587±0.63 1.819±0.86 1.408±0.69 2.703±1.84 2.696±1.30 4.526±0.34
ENSMUST00000125245 N/A 0.462±0.13 N/A N/A 0.432±0.04 N/A N/A N/A N/A N/A N/A 1.105±0.00 N/A N/A
ENSMUST00000141726 3.415±0.00 N/A N/A N/A 2.875±1.19 1.987±0.04 0.872±0.11 N/A N/A N/A N/A 4.041±1.25 N/A N/A
ENSMUST00000153265 N/A 1.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.029±0.00 N/A
ENSMUST00000179489 1.269±0.55 0.691±0.09 1.110±0.37 1.229±0.53 1.058±0.48 0.991±0.78 0.545±0.23 0.923±0.27 0.672±0.21 0.796±0.24 1.378±0.55 1.928±0.94 1.191±0.54 10.620±0.00
ENSMUSG00000053528 ENSMUST00000066005 N/A N/A N/A 0.422±0.00 0.657±0.15 N/A N/A 0.113±0.00 0.089±0.00 0.211±0.07 N/A 0.155±0.00 0.018±0.00 0.703±0.41
ENSMUSG00000057706 ENSMUST00000082237 7.368±4.90 2.666±0.63 0.958±0.09 32.299±20.46 7.930±4.14 2.736±0.58 0.706±0.18 1.969±0.46 0.738±0.52 5.653±0.34 0.182±0.06 16.192±9.40 3.922±1.50 25.119±10.32

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