C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: V-set and transmembrane domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332853 VSTM4-001 ENSG00000165633 9606 - 10:49014245-49115509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332853
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332853 6.773±0.00 5.699±0.00 1.599±0.00 1.819±1.07 3.533±1.34 3.057±2.38 3.184±1.90 1.697±0.71 2.289±1.79 4.083±0.93 0.498±0.30 7.534±5.85 3.956±0.29 4.788±2.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OS CIL_0007OS_0001 UCNEbase 10:48836195-49372114
CIL_0008ZL CIL_0008ZL_0001 VISTA 10:48905403-49506260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053175 Vstm4-001 protein_coding Mus_musculus 0 1059
ENSMUST00000100721 Vstm4-002 protein_coding Mus_musculus 0 732

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