C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: V-set and transmembrane domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100721 Vstm4-002 ENSMUSG00000050666 10090 + 14:32856789-32939487 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000100721
Transcript ID Bladder Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000100721 1.246±0.00 0.326±0.03 0.654±0.00 0.150±0.00 0.237±0.12 4.492±1.74 10.326±3.35 0.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084A CIL_00084A_0002 VISTA 14:32298253-32899721
CIL_0008ZL CIL_0008ZL_0002 VISTA 14:32470674-33071522
CIL_0007OS CIL_0007OS_0003 UCNEbase 14:32546905-33068248
CIL_0006H6 CIL_0006H6_0002 CGP 14:32856756-33185508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332853 VSTM4-001 protein_coding Homo_sapiens 0 732

Loading