C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333674 RP11-313P13.4-001 ENSG00000174384 9606 + 7:73093657-73105389 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLungENST00000333674
Transcript ID Bladder Brain Breast Heart Kidney Lung
ENST00000333674 0.546±0.00 0.542±0.00 0.156±0.00 0.134±0.00 0.528±0.00 0.354±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110709 Pms2-014 protein_coding Mus_musculus 0 538
ENSMUST00000126331 Pms2-004 retained_intron Mus_musculus 0 538
ENSMUST00000141942 Pms2-007 retained_intron Mus_musculus 0 538
ENSMUST00000148011 Pms2-001 protein_coding Mus_musculus 0 538
ENSMUST00000110707 Pms2-005 processed_transcript Mus_musculus 0 532
ENSMUST00000110710 Pms2-002 processed_transcript Mus_musculus 0 532
ENSMUST00000170083 Pms2-003 processed_transcript Mus_musculus 0 532
ENSMUST00000147910 Pms2-009 processed_transcript Mus_musculus 0 398
ENSMUST00000154781 Pms2-006 retained_intron Mus_musculus 0 374
ENSMUST00000168085 Pms2-012 processed_transcript Mus_musculus 0 366
ENSMUST00000128207 Pms2-010 retained_intron Mus_musculus 0 233

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