C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 11 Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333703 PCDH11Y-002 ENSG00000099715 9606 + Y:5000226-5105444 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverMuscleOvaryPlacentaENST00000333703
Transcript ID Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000333703 0.168±0.00 0.015±0.00 0.028±0.00 0.004±0.00 0.016±0.00 0.078±0.02 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113358 Pcdh11x-001 protein_coding Mus_musculus 0 3236
ENSMUST00000113364 Pcdh11x-202 protein_coding Mus_musculus 0 3236
ENSMUST00000050239 Pcdh11x-201 protein_coding Mus_musculus 0 3201

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