C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming, acidic coiled-coil containing protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334433 TACC2-201 ENSG00000138162 9606 + 10:122021936-122254540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000334433
Transcript ID Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000334433 0.835±0.00 2.364±0.74 2.937±2.01 4.868±3.58 0.269±0.00 1.967±0.40 74.349±0.00 1.810±0.00 0.985±0.00 1.522±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095T CIL_00095T_0001 VISTA 10:121499915-122101503
CIL_00047F CIL_00047F_0002 CGP 10:121957088-122254545
CIL_0001BC CIL_0001BC_0001 CGP 10:121989174-122338162

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0035257 IDA nuclear hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033141 Tacc2-201 protein_coding Mus_musculus 0 2124
ENSMUST00000059145 Tacc2-202 protein_coding Mus_musculus 0 2124
ENSMUST00000084513 Tacc2-203 protein_coding Mus_musculus 0 1836

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