C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholecystokinin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334681 CCK-001 ENSG00000187094 9606 - 3:42257825-42264903 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverLungOvaryPlacentaTestisENST00000334681
Transcript ID Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000334681 73.415±13.20 0.926±0.00 0.079±0.00 0.184±0.00 3.134±0.00 0.162±0.00 2.043±0.00 0.326±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RR CIL_0007RR_0001 VISTA 3:41771738-42373225
CIL_000483 CIL_000483_0001 CGP 3:42013802-42266207
CIL_00047Y CIL_00047Y_0001 CGP 3:42257825-42410600

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 ISS neuron migration
GO:0005179 TAS:IEA hormone activity
GO:0005184 ISS neuropeptide hormone activity
GO:0005515 IPI protein binding
GO:0005576 TAS:IEA extracellular region
GO:0007165 TAS signal transduction
GO:0007409 ISS axonogenesis
GO:0030424 ISS axon
GO:0042755 ISS eating behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035120 Cck-201 protein_coding Mus_musculus 0 357

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