C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholecystokinin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035120 Cck-201 ENSMUSG00000032532 10090 - 9:121489825-121495689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035120 0.535±0.05 1.213±0.66 23.326±2.30 79.709±95.05 5.491±1.88 8.813±2.54 0.182±0.12 39.205±4.29 0.197±0.07 0.237±0.00 0.119±0.00 0.463±0.24 1.510±0.70 0.651±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RR CIL_0007RR_0002 VISTA 9:121055298-121657466
CIL_000483 CIL_000483_0002 CGP 9:121366958-121495689
CIL_00047Y CIL_00047Y_0002 CGP 9:121489825-121642096

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IEA behavioral fear response
GO:0001764 IDA neuron migration
GO:0001836 IEA release of cytochrome c from mitochondria
GO:0005184 IDA neuropeptide hormone activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0006915 IEA apoptotic process
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007205 IEA protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007409 IDA axonogenesis
GO:0008284 IEA positive regulation of cell proliferation
GO:0030424 IDA axon
GO:0030425 IEA dendrite
GO:0032099 IEA negative regulation of appetite
GO:0032461 IEA positive regulation of protein oligomerization
GO:0042755 IDA eating behavior
GO:0043025 IEA neuronal cell body
GO:0043065 IEA positive regulation of apoptotic process
GO:0043194 IEA axon initial segment
GO:0043195 IEA terminal bouton
GO:0043203 IEA axon hillock
GO:0043204 IEA perikaryon
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0051901 IEA positive regulation of mitochondrial depolarization
GO:0051930 IEA regulation of sensory perception of pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334681 CCK-001 protein_coding Homo_sapiens 0 357
ENST00000396169 CCK-002 protein_coding Homo_sapiens 0 357
ENST00000434608 CCK-003 protein_coding Homo_sapiens 0 335

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