C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: threonyl-tRNA synthetase 2, mitochondrial (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109645 TARSL2 (1 of 2)-201 ENSDARG00000075385 7955 + 16:1249544-1263295 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000109645
Transcript ID Brain Heart
ENSDART00000109645 2.537±2.35 6.231±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UE CIL_0000UE_0001 CGP 16:1225187-1263364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006435 IEA threonyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335968 TARSL2-001 protein_coding Homo_sapiens 4e-17 95
ENST00000539112 TARSL2-003 nonsense_mediated_decay Homo_sapiens 3e-17 95
ENST00000558533 TARSL2-004 nonsense_mediated_decay Homo_sapiens 2e-17 95
ENST00000615656 TARSL2-201 protein_coding Homo_sapiens 3e-17 95

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