C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336066 PANK2-002 ENSG00000125779 9606 + 20:3889389-3923855 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000336066
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000336066 6.954±0.00 4.384±1.32 3.497±0.00 1.278±0.00 3.587±0.00 3.296±0.00 0.363±0.00 7.779±1.74 5.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067O CIL_00067O_0002 CGP 20:3846799-3929882
CIL_0004LL CIL_0004LL_0001 CGP 20:3888839-4015582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0015937 IEA coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184105 Pank2-003 nonsense_mediated_decay Mus_musculus 0 1537
ENSMUST00000138509 Pank2-005 processed_transcript Mus_musculus 0 1077
ENSMUST00000150843 Pank2-001 protein_coding Mus_musculus 0 1077
ENSMUST00000131779 Pank2-002 processed_transcript Mus_musculus 0 643
ENSMUST00000183349 Pank2-008 nonsense_mediated_decay Mus_musculus 0 446
ENSMUST00000184932 Pank2-004 nonsense_mediated_decay Mus_musculus 0 442
ENSMUST00000145904 Pank2-007 protein_coding Mus_musculus 0 311
ENSMUST00000183388 Pank2-006 nonsense_mediated_decay Mus_musculus 0 243

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