C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336294 TMEM39B-001 ENSG00000121775 9606 + 1:32072902-32102861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000336294
Transcript ID Adrenal Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000336294 2.096±0.00 2.673±0.00 1.501±0.00 0.980±0.00 3.171±0.00 1.762±0.00 2.857±0.00 3.686±1.75 6.174±2.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102588 Tmem39b-001 protein_coding Mus_musculus 0 2287
ENSMUST00000125445 Tmem39b-002 nonsense_mediated_decay Mus_musculus 0 1683
ENSMUST00000137640 Tmem39b-003 protein_coding Mus_musculus 0 813
ENSMUST00000154747 Tmem39b-004 retained_intron Mus_musculus 0 473
ENSMUST00000147668 Tmem39b-005 nonsense_mediated_decay Mus_musculus 0 466

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