C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ngfi-A binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170269 Nab1-002 ENSMUSG00000002881 10090 - 1:52459218-52490736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLungMuscleOvaryTestisENSMUST00000170269
Transcript ID Brain Breast Kidney Lung Muscle Ovary Testis
ENSMUST00000170269 5.733±0.00 1.766±0.00 2.870±0.25 3.996±0.17 1.235±0.00 8.767±6.40 1.746±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SM CIL_0002SM_0003 CGP 1:52163448-52500679
CIL_0002RZ CIL_0002RZ_0002 CGP 1:52457294-52651919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001958 IGI endochondral ossification
GO:0005634 IEA nucleus
GO:0006355 IGI regulation of transcription, DNA-templated
GO:0008134 IDA transcription factor binding
GO:0014037 IGI Schwann cell differentiation
GO:0042552 IGI myelination
GO:0045682 IGI regulation of epidermis development
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337386 NAB1-001 protein_coding Homo_sapiens 0 1221
ENST00000409581 NAB1-003 protein_coding Homo_sapiens 0 1221
ENST00000409641 NAB1-010 protein_coding Homo_sapiens 0 1221
ENST00000416973 NAB1-005 protein_coding Homo_sapiens 0 621
ENST00000423076 NAB1-009 protein_coding Homo_sapiens 0 438
ENST00000423376 NAB1-008 protein_coding Homo_sapiens 0 261
ENST00000426601 NAB1-004 protein_coding Homo_sapiens 0 433
ENST00000434473 NAB1-002 protein_coding Homo_sapiens 0 728
ENST00000448811 NAB1-006 protein_coding Homo_sapiens 0 612
ENST00000458074 AF013593.1-001 processed_pseudogene Homo_sapiens 0 464

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