C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choline O-acetyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337653 CHAT-001 ENSG00000070748 9606 + 10:49614037-49665104 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000337653
Transcript ID Colon
ENST00000337653 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084A CIL_00084A_0001 VISTA 10:49095759-49697208
CIL_0006F1 CIL_0006F1_0002 CGP 10:49609095-49665104

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004102 IEA choline O-acetyltransferase activity
GO:0005634 TAS nucleus
GO:0005737 TAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006644 TAS phospholipid metabolic process
GO:0006656 TAS phosphatidylcholine biosynthetic process
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0007274 IEA neuromuscular synaptic transmission
GO:0007517 IEA muscle organ development
GO:0007529 IEA establishment of synaptic specificity at neuromuscular junction
GO:0007622 IEA rhythmic behavior
GO:0007628 IEA adult walking behavior
GO:0016358 IEA dendrite development
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0030182 IEA neuron differentiation
GO:0030424 IEA axon
GO:0042136 IEA neurotransmitter biosynthetic process
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043179 IEA rhythmic excitation
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070125 Chat-201 protein_coding Mus_musculus 0 2113

Loading