C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 60, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337682 FAM60A-001 ENSG00000139146 9606 - 12:31280584-31326372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000337682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000337682 2.016±0.00 2.525±0.00 1.640±0.00 0.409±0.00 3.653±2.41 3.754±1.31 0.301±0.00 0.605±0.00 2.532±0.00 2.653±0.11 8.051±3.66 2.919±0.49 3.105±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DK CIL_0003DK_0002 CGP 12:31280584-31591097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016580 IDA Sin3 complex
GO:0030336 IMP negative regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054080 Fam60a-001 protein_coding Mus_musculus 0 1077
ENSMUST00000111562 Fam60a-007 protein_coding Mus_musculus 0 1005
ENSMUST00000081956 Fam60a-002 protein_coding Mus_musculus 0 1005
ENSMUST00000165914 Gm9027-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000132696 Fam60a-006 protein_coding Mus_musculus 0 691
ENSMUST00000139355 Fam60a-005 protein_coding Mus_musculus 0 442
ENSMUST00000146457 Fam60a-004 protein_coding Mus_musculus 0 259
ENSMUST00000143963 Fam60a-008 retained_intron Mus_musculus 0 217

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